Package index • ssdtools

Distribution Names

Functions that return character vectors of distribution names

ssd_dists(): Species Sensitivity Distributions

ssd_dists_all(): All Species Sensitivity Distributions

ssd_dists_bcanz(): BCANZ Distributions

ssd_dists_shiny(): All Shiny Species Sensitivity Distributions

Fit

Functions that fit distributions to data

ssd_fit_dists(): Fit Distributions

ssd_fit_bcanz(): Fit BCANZ Distributions

ssd_fit_burrlioz(): Fit Burrlioz Distributions

Hazard Concentrations and Proportions

Functions that calculate hazard concentrations and Proportions

ssd_hc(): Hazard Concentrations for Species Sensitivity Distributions

ssd_hc_bcanz(): BCANZ Hazard Concentrations

ssd_hp(): Hazard Proportion

ssd_hp_bcanz(): BCANZ Hazard Proportion

Manipulate Data

Functions that manipulate data

ssd_censor_data(): Censor Data

ssd_data(): Data from fitdists Object

ssd_sort_data(): Sort Species Sensitivity Data

Manipulate Fits

Functions that manipulate fits of distributions

augment(<fitdists>): Augmented Data from fitdists Object

coef(<fitdists>): Turn a fitdists Object into a Tidy Tibble

estimates(<fitdists>): Estimates for fitdists Object

glance(<fitdists>): Get a tibble summarizing each distribution

predict(<fitburrlioz>): Predict Hazard Concentrations of fitburrlioz Object

predict(<fitdists>): Predict Hazard Concentrations of fitdists Object

ssd_gof(): Goodness of Fit

subset(<fitdists>): Subset fitdists Object

tidy(<fitdists>): Turn a fitdists Object into a Tibble

Plots

Functions to Generate Plots

autoplot(<fitdists>): Plot a fitdists Object

geom_hcintersect(): Species Sensitivity Hazard Concentration Intersection

geom_ssdpoint(): Species Sensitivity Data Points

geom_ssdsegment(): Species Sensitivity Censored Segments

geom_xribbon(): Ribbon on X-Axis

scale_colour_ssd() scale_color_ssd() scale_fill_ssd(): Discrete color-blind scale for SSD Plots

ssd_label_comma(): Label numbers with significant digits and comma

ssd_label_comma_hc(): Label numbers with significant digits and comma. If hc_value is present in breaks, put on new line and make bold.

ssd_pal(): Color-blind Palette for SSD Plots

ssd_plot(): Plot Species Sensitivity Data and Distributions

ssd_plot_cdf(): Plot Cumulative Distribution Function (CDF)

ssd_plot_data(): Plot Species Sensitivity Data

StatSsdpoint StatSsdsegment GeomSsdpoint GeomSsdsegment GeomHcintersect GeomXribbon: ggproto Classes for Plotting Species Sensitivity Data and Distributions

Distributional Functions

Distribution, quantile, random functions

ssd_pburrIII3() ssd_pgamma() ssd_pgompertz() ssd_pinvpareto() ssd_plgumbel() ssd_pllogis_llogis() ssd_pllogis() ssd_plnorm_lnorm() ssd_plnorm() ssd_pmulti() ssd_pmulti_fitdists() ssd_pweibull(): Cumulative Distribution Function

ssd_qburrIII3() ssd_qgamma() ssd_qgompertz() ssd_qinvpareto() ssd_qlgumbel() ssd_qllogis_llogis() ssd_qllogis() ssd_qlnorm_lnorm() ssd_qlnorm() ssd_qmulti() ssd_qmulti_fitdists() ssd_qweibull(): Quantile Function

ssd_rburrIII3() ssd_rgamma() ssd_rgompertz() ssd_rinvpareto() ssd_rlgumbel() ssd_rllogis_llogis() ssd_rllogis() ssd_rlnorm_lnorm() ssd_rlnorm() ssd_rmulti() ssd_rmulti_fitdists() ssd_rweibull(): Random Number Generation

ssd_eburrIII3() ssd_egamma() ssd_egompertz() ssd_einvpareto() ssd_elgumbel() ssd_ellogis_llogis() ssd_ellogis() ssd_elnorm_lnorm() ssd_elnorm() ssd_emulti() ssd_eweibull(): Default Parameter Estimates

Miscellaneous

Miscellaneous functions and data

boron_pred: Model Averaged Predictions for CCME Boron Data

dist_data: Distribution Data

is.fitdists(): Is fitdists Object

ssd_licensing_md(): Licensing Markdown

reexports augment autoplot coef estimates glance logLik nobs npars plot predict waiver tidy: Objects exported from other packages

params parameters arguments args: Parameter Descriptions for ssdtools Functions

ssd_at_boundary(): Is At Boundary

ssd_ci_methods(): Confidence Interval Methods for SSDs

ssd_computable(): Is Computable Standard Errors

ssd_ecd(): Empirical Cumulative Density

ssd_ecd_data(): Empirical Cumulative Density for Species Sensitivity Data

ssd_est_methods(): Estimate Methods for SSDs

ssd_exposure(): Proportion Exposure

ssd_is_censored(): Is Censored

ssd_match_moments(): Match Moments

ssd_min_pmix(): Calculate Minimum Proportion in Mixture Models

Deprecated

Deprecated functions which will become defunct in future versions

comma_signif(): Comma and Significance Formatter

geom_ssd(): Species Sensitivity Data Points

is_censored(): Is Censored

ssd_wqg_bc(): Water Quality Guideline for British Columbia

ssd_wqg_burrlioz(): Water Quality Guideline for Burrlioz

ssd_hc_burrlioz(): Hazard Concentrations for Burrlioz Fit

ssd_plot_cf(): Cullen and Frey Plot

stat_ssd(): Plot Species Sensitivity Data

dgompertz() deprecated: Gompertz Probability Density

pgompertz(): Cumulative Distribution Function for Gompertz Distribution

qgompertz(): Quantile Function for Gompertz Distribution

rgompertz(): Random Generation for Gompertz Distribution

dlgumbel() deprecated: Log-Gumbel (Inverse Weibull) Probability Density

plgumbel(): Cumulative Distribution Function for Log-Gumbel Distribution

qlgumbel(): Quantile Function for Log-Gumbel Distribution

rlgumbel(): Random Generation for log-Gumbel Distribution