Package index • wqbench

All functions

combine_bc_species(): Combine BC Species and DB Species

combine_bc_wqg(): Combine BC Water Quality Guidelines with DB Chemicals

combine_conc_conversions(): Combine Concentration Unit Conversation Values with DB Concentration Unit

combine_concentration_endpoints(): Combine the Concentration Endpoints list to db endpoints

combine_duration_conversions(): Combine Duration Unit Conversation Values and DB duration unit

combine_lifestage(): Combine Life Stage Groups and db life stage

combine_media(): Combine Media Type Coding

combine_trophic_group(): Combine Trophic Groups and DB species

join_data(): Join Data

read_bc_species(): Read in BC Species CSV

read_bc_wqg(): Read BC Water Quality Guidelines

read_conc_conversions(): Read Concentration Unit Conversation Values

read_concentration_endpoints(): Read the Concentration Endpoints

read_duration_conversions(): Read Duration Unit Conversation

read_lifestage(): Read Life Stage Groups

read_trophic_group(): Read Trophic Groups and DB species

template: Template for Adding your own Data

wqb_add_bc_species(): Add BC Species

wqb_add_bc_wqg(): Add BC Water Quality Guidelines

wqb_add_conc_conversions(): Add Concentration Unit Conversation Values

wqb_add_concentration_endpoints(): Add the Concentration Endpoints

wqb_add_duration_conversions(): Add Duration Unit Conversation Values

wqb_add_lifestage(): Add Life Stage Groups

wqb_add_media(): Add Media Type Coding of Salt or Fresh Water

wqb_add_trophic_group(): Add Trophic Groups to Database

wqb_af(): Determine the Assessment Factors

wqb_af_bc_species(): Determine the BC Species Assessment Factor

wqb_af_ecological(): Determine the Ecological Assessment Factors

wqb_af_variation(): Determine the Species Variation Assessment Factor

wqb_aggregate(): Aggregate Data for each Species

wqb_benchmark_method(): Determine Benchmark Method

wqb_check_add_data(): Check the Uploaded Data

wqb_classify_duration(): Classify Duration

wqb_clean_data(): Compile Data

wqb_create_data_set(): Create the Data Set for the App

wqb_create_epa_ecotox(): Create the ECOTOX Database

wqb_download_epa_ecotox(): Download ECOTOX Data Files

wqb_filter_chemical(): Filter to a Single Chemical

wqb_generate_ctv(): Generate Critical Toxicity Value

wqb_join_data(): Join Data

wqb_method_det(): Deterministic Method to Generate Critical Toxicity Value for the Chemical

wqb_method_ssd(): SSD Method to Calculate Critical Toxicity Value for the Chemical

wqb_plot(): Plot Data

wqb_plot_det(): Plot the Deterministic Method Results

wqb_plot_ssd(): Plot Species Sensitivity Distribution

wqb_ssd_fit(): Fit BCANZ Distributions

wqb_ssd_hc5(): Run SSD to get Hazard Concentrations

wqb_standardize_effect(): Standardize type of Effect

wqb_summary_af(): Summary Table of the Assessment Factor Values

wqb_summary_trophic_groups(): Summary Table of Assessment Factors Information

wqb_summary_trophic_species(): Summary Table of Number of Species per Trophic Group