Function reference • pahwq

Core TUV functions

tuv(): Run the TUV model with specified options

set_tuv_aq_params(): Set required and optional aquatic parameters for TUV prior to running the model

run_tuv(): Run the TUV program

get_tuv_results(): Retrieve the results of a TUV run

PTLM

p_abs(): Calculate the total light absorption of a PAH using the results of the TUV model

plc50(): Calculate the PLC50 for a given P~abs~ and PAH chemical using the PTLM

nlc50(): Calculate the NLC50 value for a PAH or HAC using the Target Lipid Model (TLM)

plc50_multi(): Calculate the NLC50 and PLC50 for a set of PAHs

sens_kd_depth(): Sensitivity analysis for DOC, depth, and time of year

plot_sens_kd_depth(): Make a heatmap of the sensitivity analysis performed by sens_kd_depth()

p_abs_single(): Calculate the light absorption of a PAH from a single exposure experiment

TUV utilities

get_elevation(): Get elevation for a lon/lat pair

tuv_aq_defaults(): Get a list of TUV inputs and their default values

kd_305(): Calculate Kd at 305 nm for a given Dissolved Organic Carbon (DOC) concentration.

kd_lambda(): Calculate Kd at a given wavelength and DOC concentration.

view_tuv_aq_params(): View TUV aquatics options, as set by set_tuv_aq_params().

tuv_run_params(): Show the input parameters used for a TUV model run

list_tuv_dir(): List files in the directory containing the TUV files

clean_tuv_dir(): Delete the directory containing the TUV files