Plot daily summary statistics

Plots means, medians, maximums, minimums, and percentiles for each day of the year of flow values from a daily streamflow data set. Can determine statistics of rolling mean days (e.g. 7-day flows) using the roll_days argument. Calculates statistics from all values, unless specified. The Maximum-Minimum band can be removed using the plot_extremes argument and the percentile bands can be customized using the inner_percentiles and outer_percentiles arguments. Data calculated using calc_daily_stats() function. Returns a list of plots.

plot_daily_stats(
  data,
  dates = Date,
  values = Value,
  groups = STATION_NUMBER,
  station_number,
  roll_days = 1,
  roll_align = "right",
  water_year_start = 1,
  start_year,
  end_year,
  exclude_years,
  complete_years = FALSE,
  months = 1:12,
  ignore_missing = FALSE,
  plot_extremes = TRUE,
  plot_inner_percentiles = TRUE,
  plot_outer_percentiles = TRUE,
  inner_percentiles = c(25, 75),
  outer_percentiles = c(5, 95),
  add_year,
  log_discharge = TRUE,
  log_ticks = ifelse(log_discharge, TRUE, FALSE),
  include_title = FALSE
)

Arguments

data: Data frame of daily data that contains columns of dates, flow values, and (optional) groups (e.g. station numbers). Leave blank or set to NULL if using station_number argument.
dates: Name of column in data that contains dates formatted YYYY-MM-DD. Only required if dates column name is not 'Date' (default). Leave blank or set to NULL if using station_number argument.
values: Name of column in data that contains numeric flow values, in units of cubic metres per second. Only required if values column name is not 'Value' (default). Leave blank if using station_number argument.
groups: Name of column in data that contains unique identifiers for different data sets, if applicable. Only required if groups column name is not 'STATION_NUMBER'. Function will automatically group by a column named 'STATION_NUMBER' if present. Remove the 'STATION_NUMBER' column beforehand to remove this grouping. Leave blank if using station_number argument.
station_number: Character string vector of seven digit Water Survey of Canada station numbers (e.g. "08NM116") of which to extract daily streamflow data from a HYDAT database. Requires tidyhydat package and a HYDAT database. Leave blank if using data argument.
roll_days: Numeric value of the number of days to apply a rolling mean. Default 1.
roll_align: Character string identifying the direction of the rolling mean from the specified date, either by the first ('left'), last ('right'), or middle ('center') day of the rolling n-day group of observations. Default 'right'.
water_year_start: Numeric value indicating the month (1 through 12) of the start of water year for analysis. Default 1.
start_year: Numeric value of the first year to consider for analysis. Leave blank or set well before start date (i.e. 1800) to use from the first year of the source data.
end_year: Numeric value of the last year to consider for analysis. Leave blank or set well after end date (i.e. 2100) to use up to the last year of the source data.
exclude_years: Numeric vector of years to exclude from analysis. Leave blank or set to NULL to include all years.
complete_years: Logical values indicating whether to include only years with complete data in analysis. Default FALSE.
months: Numeric vector of months to include in analysis. For example, 3 for March, 6:8 for Jun-Aug or c(10:12,1) for first four months (Oct-Jan) when water_year_start = 10 (Oct). Default summarizes all months (1:12).
ignore_missing: Logical value indicating whether dates with missing values should be included in the calculation. If TRUE then a statistic will be calculated regardless of missing dates. If FALSE then only those statistics from time periods with no missing dates will be returned. Default FALSE.
plot_extremes: Logical value to indicate plotting a ribbon with the range of daily minimum and maximum flows. Default TRUE.
plot_inner_percentiles: Logical value indicating whether to plot the inner percentiles ribbon. Default TRUE.
plot_outer_percentiles: Logical value indicating whether to plot the outer percentiles ribbon. Default TRUE.
inner_percentiles: Numeric vector of two percentile values indicating the lower and upper limits of the inner percentiles ribbon for plotting. Default c(25,75), set to NULL for no inner ribbon.
outer_percentiles: Numeric vector of two percentile values indicating the lower and upper limits of the outer percentiles ribbon for plotting. Default c(5,95), set to NULL for no outer ribbon.
add_year: Numeric value indicating a year of daily flows to add to the daily statistics plot. Leave blank or set to NULL for no years.
log_discharge: Logical value to indicate plotting the discharge axis (Y-axis) on a logarithmic scale. Default FALSE.
log_ticks: Logical value to indicate plotting logarithmic scale ticks when log_discharge = TRUE. Ticks will not appear when log_discharge = FALSE. Default to TRUE when log_discharge = TRUE.
include_title: Logical value to indicate adding the group/station number to the plot, if provided. Default FALSE.

Value

A list of ggplot2 objects with the following for each station provided:

Daily_Stats: a plot that contains daily flow statistics

Default plots on each object:

Mean: daily mean
Median: daily median
25-75 Percentiles: a ribbon showing the range of data between the daily 25th and 75th percentiles
5-95 Percentiles: a ribbon showing the range of data between the daily 5th and 95th percentiles
Minimum-Maximum: a ribbon showing the range of data between the daily minimum and maximums
'Year': (on annual plots) the daily flows for the designated year

Examples

# Run if HYDAT database has been downloaded (using tidyhydat::download_hydat())
if (file.exists(tidyhydat::hy_downloaded_db())) {

# Plot daily statistics using a data frame and data argument with defaults
flow_data <- tidyhydat::hy_daily_flows(station_number = "08NM116")
plot_daily_stats(data = flow_data,
                 start_year = 1980)
                  
# Plot daily statistics using only years with no missing data
plot_daily_stats(station_number = "08NM116",
                 complete_years = TRUE)
 
# Plot daily statistics and add a specific year's daily flows                
plot_daily_stats(station_number = "08NM116",
                 start_year = 1980,
                 add_year = 1985)                
                  
# Plot daily statistics for 7-day flows for July-September months only
plot_daily_stats(station_number = "08NM116",
                 start_year = 1980,
                 roll_days = 7,
                 months = 7:9)
                 
}
#> $Daily_Statistics

#>

Arguments

Value

See also

Examples