All functions |
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Add a column defining linked status |
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Calculate the age of an invidividual on a certain date. |
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Convert .dat.gz files into arrow formats |
Convert dat.gz file to Apache Arrow Datasets using partitioned folder structures |
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Delete all content from any temp directory |
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An opinionated template for package-like targets project |
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Convenience function to generate templates for documenting export datasets |
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Get path to dipr example files |
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Assign a category to a vector of icd codes |
Update the dipr package from gitlab |
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Use the template export documentation |
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Write a parquet file in the SRE |
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A function to extract the data name from a path |
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Search across columns in a data.frame or an arrow .Dataset for rows matching a given pattern. |
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Wrapper to filter out unlinked studyids from either a data.frame or a Dataset |
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Add a logical flag (new column) based on a pattern search across columns |
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Get the dat path of a particular dataset for a given core table name |
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Get paths of data dictionaries |
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Return a data.frame of all repos available to the project you are currently in |
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Create age categories from a age vector |
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Add the boilerplate Apache header to the top of a source code file |
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Add the boilerplate Creative Commons Attribution 4.0 (CC-BY) header to the top of a source code file |
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Install a package from the SRE gitlab. |
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Function moved to the hawkeye package |
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Prepare repo for import into the SRE through OCWA |
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Read compressed files in R |
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Read Health Data Dictionaries |
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Read data dictionaries in nflt format |
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Copy saved RStudio preferences from PopData Gitlab repo to you local SRE machine |
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Set gitlab credentials from R |